BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030B08SP1|AL429171
(981 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig877 1855 0.0
>3x_Contig877
Length = 2681
Score = 1855 bits (932), Expect = 0.0
Identities = 964/976 (98%), Gaps = 2/976 (0%)
Strand = Plus / Plus
Query: 1 gatcattaaaaaaccaccattttcaataaagcagttcgttggtgccactcttacgtttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gatcattaaaaaaccaccattttcaataaagcagttcgttggtgccactcttacgtttgc 1440
Query: 61 gtttactcttttcgtttctggtatattttatttttgaattaggcgctcagctggcatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gtttactcttttcgtttctggtatattttatttttgaattaggcgctcagctggcatctt 1500
Query: 121 caacgcttcccttttgcatgtttattggaagaatgagttgtcctatagtcatttctggtc 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1501 caacgcttcccttttgcatgtttattggaagaatgagtcgtcctatagtcatttctggtc 1560
Query: 181 caagtggtaccggtaagtccactcttttgaagaagttgttcgcggagtacccaacgagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 caagtggtaccggtaagtccactcttttgaagaagttgttcgcggagtacccaacgagtt 1620
Query: 241 tcgggttctctgtttcgtctactactagacagccaagaaatggtgaagtgaacggtaagg 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 tcgggttctctgtatcgtctactactagacagccaagaaatggtgaagtgaacggtaagg 1680
Query: 301 actacaatttcgttacagtggacgagttcaaatcgatgatagataacaagaagttcatcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 actacaatttcgttacagtggacgagttcaaatcgatgatagataacaagaagttcatcg 1740
Query: 361 aatgggcacagttctctggtaactactacggaacgactatcgagtctgtkaaggaggtga 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1741 aatgggcacagttctctggtaactactacggaacgactatcgagtctgtgaaggaggtga 1800
Query: 421 caaacagcggcaagacgtgtattttggacattgacatgcaaggtgtgaaatctgtgaaac 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1801 caaacagcggcaagacgtgtatcttggacattgacatgcaaggtgtgaaatctgtgaaac 1860
Query: 481 agaccgatttgaacgctaggttccttttcgtggctccaccttctgttgaagtgctgaagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 agaccgatttgaacgctaggttccttttcgtggctccaccttctgttgaagtgctgaagg 1920
Query: 541 aaaggttgactggcagaggcaccgagacgccagaatctcttgagaaaagactaaatgcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 aaaggttgactggcagaggcaccgagacgccagaatctcttgagaaaagactaaatgcag 1980
Query: 601 ccattgccgaattggaatatgctgagactggcgcacatgacttgaccgttgtcaacgacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 ccattgccgaattggaatatgctgagactggcgcacatgacttgaccgttgtcaacgacg 2040
Query: 661 atttggatgccgcatacgagaaattgaaacaattcatcttcgaggaagagaacaagagtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 atttggatgccgcatacgagaaattgaaacaattcatcttcgaggaagagaacaagagtg 2100
Query: 721 gaaatgattkagaactcagaaatttctgaaatataatatactacatatatgcataccgta 780
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 gaaatgattgagaactcagaaatttctgaaatataatatactacatatatgcataccgta 2160
Query: 781 cccttatgtatatttaagattattagttaccatcaagagggaacgagtwctggtcagtgc 840
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2161 cccttatgtatatttaagattattagttaccatcaagagggaacgagtactggtcagtgc 2220
Query: 841 cctgtcattggtgtygtgttaactgacacctgtttactttgccattaccctattgtacaa 900
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 cctgtcattggtgtcgtgttaactgacacctgtttactttgccattaccctattgtacaa 2280
Query: 901 atttcccacacaagtwatgagcaaatatcgaaataaagggatagtag-aatwaagtttcc 959
||||||||||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct: 2281 atttcccacacaagtaatgagcaaatatcgaaataaaggaatagtagaaataaagtttcc 2340
Query: 960 -accgataaagagatt 974
|||||||||||||||
Sbjct: 2341 aaccgataaagagatt 2356
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7176
Number of Sequences: 1807
Number of extensions: 7176
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 981
length of database: 10,358,551
effective HSP length: 16
effective length of query: 965
effective length of database: 10,329,639
effective search space: 9968101635
effective search space used: 9968101635
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)